Kuceyeski, Amy

Publications

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selected publications

Larger lesion volume in people with multiple sclerosis is associated with increased transition energies between brain states and decreased entropy of brain activity. Network neuroscience (Cambridge, Mass.). 2023 Academic Article GET IT
Times cited: 42
Association of brain tissue cerebrospinal fluid fraction with age in healthy cognitively normal adults. Frontiers in aging neuroscience. 2023 Academic Article GET IT
Times cited: 5392
Computational modelling in disorders of consciousness: Closing the gap towards personalised models for restoring consciousness. NeuroImage. 2023 Academic Article GET IT
Time-resolved network control analysis links reduced control energy under DMT with the serotonin 2a receptor, signal diversity, and subjective experience. bioRxiv : the preprint server for biology. 2023 Article GET IT
Functional alteration due to structural damage is network dependent: insight from multiple sclerosis. Cerebral cortex (New York, N.Y. : 1991). 2023 Academic Article GET IT
Comparisons of electrophysiological markers of impaired executive attention after traumatic brain injury and in healthy aging. NeuroImage. 2023 Academic Article GET IT
Glymphatic clearance estimated using diffusion tensor imaging along perivascular spaces is reduced after traumatic brain injury and correlates with plasma neurofilament light, a biomarker of injury severity. Brain communications. 2023 Academic Article GET IT
Modulating human brain responses via optimal natural image selection and synthetic image generation. ArXiv. 2023 Article GET IT
Graph-matching distance between individuals' functional connectomes varies with relatedness, age, and cognitive score. Human brain mapping. 2023 Academic Article GET IT
Association of Brain Age, Lesion Volume, and Functional Outcome in Patients With Stroke. Neurology. 2023 Academic Article GET IT
Transitions between cognitive topographies: contributions of network structure, neuromodulation, and disease. bioRxiv : the preprint server for biology. 2023 Article GET IT
Times cited: 25
The sequence of regional structural disconnectivity due to multiple sclerosis lesions. bioRxiv : the preprint server for biology. 2023 Article GET IT
Times cited: 11
Altered brain activity and functional connectivity after MDMA-assisted therapy for post-traumatic stress disorder. Frontiers in psychiatry. 2023 Academic Article GET IT
Times cited: 494
Personalized visual encoding model construction with small data. Communications biology. 2022 Academic Article GET IT
Times cited: 1
Editorial: Advances in brain functional and structural networks modeling via graph theory. Frontiers in neuroscience. 2022 Editorial Article GET IT
Receptor-informed network control theory links LSD and psilocybin to a flattening of the brain's control energy landscape. Nature communications. 2022 Academic Article GET IT
Times cited: 12
Frontoparietal network activation is associated with motor recovery in ischemic stroke patients. Communications biology. 2022 Academic Article GET IT
Times cited: 1
Early effect of thrombolysis on structural brain network organisation after anterior-circulation stroke in the randomized WAKE-UP trial. Human brain mapping. 2022 Academic Article GET IT
Longitudinal alterations in gamma-aminobutyric acid (GABA_A) receptor availability over ∼ 1 year following traumatic brain injury. Brain communications. 2022 Academic Article GET IT
Chronic Stroke Sensorimotor Impairment Is Related to Smaller Hippocampal Volumes: An ENIGMA Analysis. Journal of the American Heart Association. 2022 Review GET IT
Times cited: 3
Disease correlates of rim lesions on quantitative susceptibility mapping in multiple sclerosis. Scientific reports. 2022 Academic Article GET IT
Times cited: 8
Lesions in different prefrontal sectors are associated with different types of acquired personality disturbances. Cortex; a journal devoted to the study of the nervous system and behavior. 2021 Academic Article GET IT
Times cited: 2
Predicting individual task contrasts from resting-state functional connectivity using a surface-based convolutional network. NeuroImage. 2021 Academic Article GET IT
Times cited: 7
NeuroGen: Activation optimized image synthesis for discovery neuroscience. NeuroImage. 2021 Academic Article GET IT
Times cited: 4
Dynamic Functional Connectivity Better Predicts Disability Than Structural and Static Functional Connectivity in People With Multiple Sclerosis. Frontiers in neuroscience. 2021 Academic Article GET IT
Times cited: 47
Shared functional connections within and between cortical networks predict cognitive abilities in adult males and females. Human brain mapping. 2021 Academic Article GET IT
Times cited: 6
Smaller spared subcortical nuclei are associated with worse post-stroke sensorimotor outcomes in 28 cohorts worldwide. Brain communications. 2021 Academic Article GET IT
Times cited: 21
Functional connectome reorganization relates to post-stroke motor recovery and structural and functional disconnection. NeuroImage. 2021 Academic Article GET IT
Times cited: 15
Estimated connectivity networks outperform observed connectivity networks when classifying people with multiple sclerosis into disability groups. NeuroImage. Clinical. 2021 Academic Article GET IT
Times cited: 3
Machine learning to investigate superficial white matter integrity in early multiple sclerosis. Journal of neuroimaging : official journal of the American Society of Neuroimaging. 2021 Academic Article GET IT
Times cited: 2
Structural disconnectivity from paramagnetic rim lesions is related to disability in multiple sclerosis. Brain and behavior. 2021 Academic Article GET IT
Times cited: 6
Lesion features on magnetic resonance imaging discriminate multiple sclerosis patients. European journal of neurology. 2021 Academic Article GET IT
Times cited: 1
Heritability and interindividual variability of regional structure-function coupling. Nature communications. 2021 Academic Article GET IT
Times cited: 32
Estimated Regional White Matter Hyperintensity Burden, Resting State Functional Connectivity, and Cognitive Functions in Older Adults. The American journal of geriatric psychiatry : official journal of the American Association for Geriatric Psychiatry. 2021 Academic Article GET IT
Times cited: 1
Cortical response to naturalistic stimuli is largely predictable with deep neural networks. Science advances. 2021 Academic Article GET IT
Times cited: 11
Distinct functional and structural connections predict crystallised and fluid cognition in healthy adults. Human brain mapping. 2021 Academic Article GET IT
Times cited: 24
Neuroimaging correlates of emotional response-inhibition discriminate between young depressed adults with and without sub-threshold bipolar symptoms (Emotional Response-inhibition in Young Depressed Adults). Journal of affective disorders. 2020 Academic Article GET IT
Times cited: 2
A Multi-Ligand Imaging Study Exploring GABAergic Receptor Expression and Inflammation in Multiple Sclerosis. Molecular imaging and biology. 2020 Academic Article GET IT
Times cited: 4
Quantitative multimodal imaging in traumatic brain injuries producing impaired cognition. Current opinion in neurology. 2020 Review GET IT
Times cited: 2
Estimation of Multiple Sclerosis lesion age on magnetic resonance imaging. NeuroImage. 2020 Academic Article GET IT
Times cited: 4
Sex classification using long-range temporal dependence of resting-state functional MRI time series. Human brain mapping. 2020 Academic Article GET IT
Times cited: 15
Functional Connectivity and Structural Disruption in the Default-Mode Network Predicts Cognitive Rehabilitation Outcomes in Multiple Sclerosis. Journal of neuroimaging : official journal of the American Society of Neuroimaging. 2020 Academic Article GET IT
Times cited: 11
The ENIGMA Stroke Recovery Working Group: Big data neuroimaging to study brain-behavior relationships after stroke. Human brain mapping. 2020 Review GET IT
Times cited: 22
Machine Learning Methods Predict Individual Upper-Limb Motor Impairment Following Therapy in Chronic Stroke. Neurorehabilitation and neural repair. 2020 Academic Article GET IT
Times cited: 25
Longitudinal increases in structural connectome segregation and functional connectome integration are associated with better recovery after mild TBI. Human brain mapping. 2019 Academic Article GET IT
Times cited: 16
Ensemble learning with 3D convolutional neural networks for functional connectome-based prediction. NeuroImage. 2019 Academic Article GET IT
Times cited: 58
Machine learning in resting-state fMRI analysis. Magnetic resonance imaging. 2019 Review GET IT
Times cited: 81
The impact of white matter hyperintensities on the structural connectome in late-life depression: Relationship to executive functions. NeuroImage. Clinical. 2019 Academic Article GET IT
Times cited: 34
NeuroMeasure: A Software Package for Quantification of Cortical Motor Maps Using Frameless Stereotaxic Transcranial Magnetic Stimulation. Frontiers in neuroinformatics. 2019 Academic Article GET IT
Times cited: 214
Resting-State Functional Connectivity Magnetic Resonance Imaging and Outcome After Acute Stroke. Stroke. 2018 Academic Article GET IT
Times cited: 41
Comparison of two different methods of image analysis for the assessment of microglial activation in patients with multiple sclerosis using (R)-[N-methyl-carbon-11]PK11195. PloS one. 2018 Academic Article GET IT
Times cited: 7
Impact of Focal White Matter Damage on Localized Subcortical Gray Matter Atrophy in Multiple Sclerosis: A 5-Year Study. AJNR. American journal of neuroradiology. 2018 Academic Article GET IT
Times cited: 14
Baseline biomarkers of connectome disruption and atrophy predict future processing speed in early multiple sclerosis. NeuroImage. Clinical. 2018 Academic Article GET IT
Times cited: 19
White matter tract network disruption explains reduced conscientiousness in multiple sclerosis. Human brain mapping. 2018 Academic Article GET IT
Times cited: 17
Combining Quantitative Susceptibility Mapping with Automatic Zero Reference (QSM0) and Myelin Water Fraction Imaging to Quantify Iron-Related Myelin Damage in Chronic Active MS Lesions. AJNR. American journal of neuroradiology. 2017 Academic Article GET IT
Times cited: 27
Reduction of PK11195 uptake observed in multiple sclerosis lesions after natalizumab initiation. Multiple sclerosis and related disorders. 2017 Academic Article GET IT
Times cited: 23
The Brain's Structural Connectome Mediates the Relationship between Regional Neuroimaging Biomarkers in Alzheimer's Disease. Journal of Alzheimer's disease : JAD. 2017 Academic Article GET IT
Times cited: 16
Cognitive deficits in non-demented diabetic elderly appear independent of brain amyloidosis. Journal of the neurological sciences. 2016 Academic Article GET IT
Times cited: 3
The application of a mathematical model linking structural and functional connectomes in severe brain injury. NeuroImage. Clinical. 2016 Academic Article GET IT
Times cited: 26
Structural connectome disruption at baseline predicts 6-months post-stroke outcome. Human brain mapping. 2016 Academic Article GET IT
Times cited: 53
Opportunities for Guided Multichannel Non-invasive Transcranial Current Stimulation in Poststroke Rehabilitation. Frontiers in neurology. 2016 Review GET IT
Times cited: 34
Profilometry: A new statistical framework for the characterization of white matter pathways, with application to multiple sclerosis. Human brain mapping. 2015 Academic Article GET IT
Times cited: 23
A mathematical simulation to assess variability in lung nodule size measurement associated with nodule-slice position. Journal of digital imaging. 2015 Academic Article GET IT
Times cited: 1
Exploring the brain's structural connectome: A quantitative stroke lesion-dysfunction mapping study. Human brain mapping. 2015 Academic Article GET IT
Times cited: 32
Network Diffusion Model of Progression Predicts Longitudinal Patterns of Atrophy and Metabolism in Alzheimer's Disease. Cell reports. 2015 Academic Article GET IT
Times cited: 123
Modeling the relationship among gray matter atrophy, abnormalities in connecting white matter, and cognitive performance in early multiple sclerosis. AJNR. American journal of neuroradiology. 2014 Academic Article GET IT
Times cited: 24
Reduced glucose uptake and Aβ in brain regions with hyperintensities in connected white matter. NeuroImage. 2014 Academic Article GET IT
Times cited: 21
Brainography: an atlas-independent surface and network rendering tool for neural connectivity visualization. Neuroinformatics. 2014 Article GET IT
Times cited: 9
Spatial patterns of genome-wide expression profiles reflect anatomic and fiber connectivity architecture of healthy human brain. Human brain mapping. 2014 Academic Article GET IT
Times cited: 35
Predicting future brain tissue loss from white matter connectivity disruption in ischemic stroke. Stroke. 2014 Academic Article GET IT
Times cited: 37
The Network Modification (NeMo) Tool: elucidating the effect of white matter integrity changes on cortical and subcortical structural connectivity. Brain connectivity. 2013 Academic Article GET IT
Times cited: 66
Loss in connectivity among regions of the brain reward system in alcohol dependence. Human brain mapping. 2012 Academic Article GET IT
Times cited: 22
Statistics of weighted brain networks reveal hierarchical organization and Gaussian degree distribution. PloS one. 2012 Academic Article GET IT
Times cited: 18
A network diffusion model of disease progression in dementia. Neuron. 2012 Academic Article GET IT
Times cited: 448
Linking white matter integrity loss to associated cortical regions using structural connectivity information in Alzheimer's disease and fronto-temporal dementia: the Loss in Connectivity (LoCo) score. NeuroImage. 2012 Academic Article GET IT
Times cited: 23
The generation and validation of white matter connectivity importance maps. NeuroImage. 2011 Academic Article GET IT
Times cited: 32

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Research

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Co-investigator Network

Funding awarded

Heritability and cognitive implications of structural-functional connectome coupling awarded by National Institute of Mental Health Principal Investigator 2021 - 2024
Multi-Modal Imaging of the Mechanisms Underlying Impaired Executive Attention After Traumatic Brain Injury awarded by National Institute of Neurological Disorders & Stroke Principal Investigator 2017 - 2023

CSF clearance and brain amyloid dynamics after traumatic brain injury awarded by National Institute of Neurological Disorders & Stroke Co-Investigator 2019 - 2023
Identifying mechanisms of tissue injury in MS lesions: a multi-modality imaging approach awarded by National Institute of Neurological Disorders & Stroke Co-Investigator 2018 - 2023
Quantitative MRI of Lesion Iron and Myelin Repair awarded by National Multiple Sclerosis Society Co-Investigator 2016 - 2023
Predictive Model of Spread of Parkinson''s Pathology Using Network Diffusion awarded by National Institute of Neurological Disorders & Stroke Co-Investigator 2016 - 2023

Multi-modal neuroimaging and cognitive assessment of females with multiple sclerosis across different stages of menopause awarded by National Multiple Sclerosis Society Key Personnel 2023 - 2028
New PET/CT System for Human and Non-human Primate Imaging awarded by National Institutes of Health, Office of the Director Key Personnel 2023 - 2024
Major Cyclotron Upgrades and Refurbishment awarded by National Institutes of Health, Office of the Director Key Personnel 2021 - 2023

Learning high-dimensional functional connectomes of heterogeneous populations awarded by National Institute of General Medical Sciences Principal Investigator Subaward 2020 - 2023

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Background

education and training

Ph.D., Case Western Reserve University 2009
B.S., Mount Union College 2004

Contact

full name

Amy Kuceyeski

primary email

amk2012@med.cornell.edu

VIVO Weill Cornell Medical College

Amy Kuceyeski Associate Professor of Mathematics in Radiology

Publications

selected publications

Research

Funding awarded

Background

education and training

Contact

full name

primary email