Risso, Davide

Publications

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selected publications

Publisher Correction: Orchestrating single-cell analysis with Bioconductor. Nature methods. 2020 Article GET IT
Times cited: 3
Orchestrating single-cell analysis with Bioconductor. Nature methods. 2019 Review GET IT
Times cited: 211
Epigenetic evolution and lineage histories of chronic lymphocytic leukaemia. Nature. 2019 Academic Article GET IT
Times cited: 140
Performance Assessment and Selection of Normalization Procedures for Single-Cell RNA-Seq. Cell systems. 2019 Academic Article GET IT
Times cited: 73
Shank3 modulates sleep and expression of circadian transcription factors. eLife. 2019 Academic Article GET IT
Times cited: 37
Complementary networks of cortical somatostatin interneurons enforce layer specific control. eLife. 2019 Academic Article GET IT
Times cited: 50
Publisher Correction: A general and flexible method for signal extraction from single-cell RNA-seq data. Nature communications. 2019 Academic Article GET IT
Times cited: 7
clusterExperiment and RSEC: A Bioconductor package and framework for clustering of single-cell and other large gene expression datasets. PLoS computational biology. 2018 Academic Article GET IT
Times cited: 27
Slingshot: cell lineage and pseudotime inference for single-cell transcriptomics. BMC genomics. 2018 Academic Article GET IT
Times cited: 769
Observation weights unlock bulk RNA-seq tools for zero inflation and single-cell applications. Genome biology. 2018 Academic Article GET IT
Times cited: 106
A general and flexible method for signal extraction from single-cell RNA-seq data. Nature communications. 2018 Academic Article GET IT
Times cited: 307
Learning-dependent chromatin remodeling highlights noncoding regulatory regions linked to autism. Science signaling. 2018 Academic Article GET IT
Times cited: 11
Injury Activates Transient Olfactory Stem Cell States with Diverse Lineage Capacities. Cell stem cell. 2017 Academic Article GET IT
Times cited: 45
Bioconductor workflow for single-cell RNA sequencing: Normalization, dimensionality reduction, clustering, and lineage inference. F1000Research. 2017 Academic Article GET IT
Times cited: 10
Normalizing single-cell RNA sequencing data: challenges and opportunities. Nature methods. 2017 Academic Article GET IT
Times cited: 239
Deconstructing Olfactory Stem Cell Trajectories at Single-Cell Resolution. Cell stem cell. 2017 Academic Article GET IT
Times cited: 119
Corrigendum: Global diversity in the TAS2R38 bitter taste receptor: revisiting a classic evolutionary PROPosal. Scientific reports. 2016 Academic Article GET IT
Global diversity in the TAS2R38 bitter taste receptor: revisiting a classic evolutionary PROPosal. Scientific reports. 2016 Academic Article GET IT
Times cited: 68
Comparison of computed tomography and magnetic resonance imaging in the discrimination of intraperitoneal and extraperitoneal rectal cancer: initial experience. Clinical imaging. 2015 Academic Article GET IT
Times cited: 3
Estimating Sampling Selection Bias in Human Genetics: A Phenomenological Approach. PloS one. 2015 Academic Article GET IT
Times cited: 3
A potential trigger for pine mouth: a case of a homozygous phenylthiocarbamide taster. 2015 GET IT
Times cited: 10
How data analysis affects power, reproducibility and biological insight of RNA-seq studies in complex datasets. Nucleic acids research. 2015 Academic Article GET IT
Times cited: 56
Genetic variation in taste receptor pseudogenes provides evidence for a dynamic role in human evolution. BMC evolutionary biology. 2014 Academic Article GET IT
Times cited: 19
Normalization of RNA-seq data using factor analysis of control genes or samples. Nature biotechnology. 2014 Academic Article GET IT
Times cited: 947
Genetic signature of differential sensitivity to stevioside in the Italian population. Genes & nutrition. 2014 Academic Article GET IT
Times cited: 151
Silencing of odorant receptor genes by G protein βγ signaling ensures the expression of one odorant receptor per olfactory sensory neuron. Neuron. 2014 Academic Article GET IT
Times cited: 40
GC-content normalization for RNA-Seq data. BMC bioinformatics. 2011 Academic Article GET IT
Times cited: 467
Statistical Test of Expression Pattern (STEPath): a new strategy to integrate gene expression data with genomic information in individual and meta-analysis studies. BMC bioinformatics. 2011 Academic Article GET IT
Times cited: 4
A novel approach to the clustering of microarray data via nonparametric density estimation. BMC bioinformatics. 2011 Academic Article GET IT
Times cited: 16
A modified LOESS normalization applied to microRNA arrays: a comparative evaluation. Bioinformatics (Oxford, England). 2009 Academic Article GET IT
Times cited: 35
A-MADMAN: annotation-based microarray data meta-analysis tool. BMC bioinformatics. 2009 Academic Article GET IT
Times cited: 29
A comparison on effects of normalisations in the detection of differentially expressed genes. BMC bioinformatics. 2009 Academic Article GET IT
Times cited: 14

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Background

education and training

Ph.D., University of Padova (Italy) 2012
M.S., University of Padova (Italy) 2008
B.S., University of Padova (Italy) 2005

Contact

full name

Davide Risso

primary email

dar2062@med.cornell.edu

VIVO Weill Cornell Medical College

Davide Risso Adjunct Assistant Professor of Population Health Sciences

Publications

selected publications

Background

education and training

Contact

full name

primary email