Mallick, Himel

Publications

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selected publications

Population structure discovery in meta-analyzed microbial communities and inflammatory bowel disease using MMUPHin. Genome biology. 2022 Review GET IT
Times cited: 6
Differential expression of single-cell RNA-seq data using Tweedie models. Statistics in medicine. 2022 Academic Article GET IT
Times cited: 4
Editorial: Methods for Single-Cell and Microbiome Sequencing Data. Frontiers in genetics. 2022 Editorial Article GET IT
Multivariable association discovery in population-scale meta-omics studies. PLoS computational biology. 2021 Academic Article GET IT
Times cited: 261
Omics community detection using multi-resolution clustering. Bioinformatics (Oxford, England). 2021 Academic Article GET IT
Times cited: 4
A statistical model for describing and simulating microbial community profiles. PLoS computational biology. 2021 Academic Article GET IT
Times cited: 12
The reciprocal Bayesian LASSO. Statistics in medicine. 2021 Academic Article GET IT
Times cited: 4
Editorial: Statistical and Computational Methods for Microbiome Multi-Omics Data. Frontiers in genetics. 2020 Editorial Article GET IT
Times cited: 1
Global chemical effects of the microbiome include new bile-acid conjugations. Nature. 2020 Academic Article GET IT
Times cited: 214
Association Between Sulfur-Metabolizing Bacterial Communities in Stool and Risk of Distal Colorectal Cancer in Men. Gastroenterology. 2020 Academic Article GET IT
Times cited: 73
Predictive metabolomic profiling of microbial communities using amplicon or metagenomic sequences. Nature communications. 2019 Academic Article GET IT
Times cited: 117
Multi-omics of the gut microbial ecosystem in inflammatory bowel diseases. Nature. 2019 Review GET IT
Times cited: 1111
Author Correction: Gut microbiome structure and metabolic activity in inflammatory bowel disease. Nature microbiology. 2019 Article GET IT
Times cited: 15
Gut microbiome structure and metabolic activity in inflammatory bowel disease. Nature microbiology. 2018 Academic Article GET IT
Times cited: 763
Group regularization for zero-inflated negative binomial regression models with an application to health care demand in Germany. Statistics in medicine. 2018 Academic Article GET IT
Times cited: 7
Differences in Clinical Course, Genetics, and the Microbiome Between Familial and Sporadic Inflammatory Bowel Diseases. Journal of Crohn's & colitis. 2018 Academic Article GET IT
Times cited: 21
Metatranscriptome of human faecal microbial communities in a cohort of adult men. Nature microbiology. 2018 Academic Article GET IT
Times cited: 114
Stability of the human faecal microbiome in a cohort of adult men. Nature microbiology. 2018 Academic Article GET IT
Times cited: 137
Experimental design and quantitative analysis of microbial community multiomics. Genome biology. 2017 Review GET IT
Times cited: 109
A Bayesian method for detecting pairwise associations in compositional data. PLoS computational biology. 2017 Academic Article GET IT
Times cited: 25
Bayesian Bridge Regression. Journal of applied statistics. 2017 Academic Article GET IT
Times cited: 12
Bayesian Group Bridge for Bi-level Variable Selection. Computational statistics & data analysis. 2017 Academic Article GET IT
Times cited: 5
Negative binomial mixed models for analyzing microbiome count data. BMC bioinformatics. 2017 Academic Article GET IT
Times cited: 82
EM Adaptive LASSO-A Multilocus Modeling Strategy for Detecting SNPs Associated with Zero-inflated Count Phenotypes. Frontiers in genetics. 2016 Academic Article GET IT
Times cited: 8
Clinical trial designs incorporating predictive biomarkers. Cancer treatment reviews. 2016 Review GET IT
Times cited: 55
A genetic association study detects haplotypes associated with obstructive heart defects. Human genetics. 2014 Academic Article GET IT
Times cited: 9
Transcriptomes and shRNA suppressors in a TP53 allele-specific model of early-onset colon cancer in African Americans. Molecular cancer research : MCR. 2014 Academic Article GET IT
Times cited: 12
Multiple comparisons in genetic association studies: a hierarchical modeling approach. Statistical applications in genetics and molecular biology. 2014 Academic Article GET IT
Times cited: 7
A New Bayesian Lasso. Statistics and its interface. 2014 Academic Article GET IT
A risk algorithm for assessing short-term mortality for obese black and white men and women. Obesity (Silver Spring, Md.). 2013 Academic Article GET IT
Oronasopharyngeal suction versus wiping of the mouth and nose at birth: a randomised equivalency trial. Lancet (London, England). 2013 Academic Article GET IT
Times cited: 40
Bayesian Methods for High Dimensional Linear Models. Journal of biometrics & biostatistics. 2013 Academic Article GET IT
Mortality and intestinal failure in surgical necrotizing enterocolitis. Journal of pediatric surgery. 2013 Academic Article GET IT
Times cited: 20

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Background

education and training

Ph.D., University of Alabama at Birmingham 2015
M.Sc., Indian Institute of Technology (India) 2009
B.Sc., Calcutta University (India) 2007

Contact

full name

Himel Mallick

primary email

him4004@med.cornell.edu

VIVO Weill Cornell Medical College

Himel Mallick Assistant Professor of Population Health Sciences

Publications

selected publications

Background

education and training

Contact

full name

primary email