selected publications
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Deep computational image analysis of immune cell niches reveals treatment-specific outcome associations in lung cancer.
NPJ precision oncology.
2023
Academic Article
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Times cited: 2136 -
A tumor vasculature-based imaging biomarker for predicting response and survival in patients with lung cancer treated with checkpoint inhibitors.
Science advances.
2022
Academic Article
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Times cited: 1 -
Rapid detection of SARS-CoV-2 variants of concern by single nucleotide polymorphism genotyping using TaqMan assays.
Diagnostic microbiology and infectious disease.
2022
Academic Article
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Times cited: 1 -
Alignment of Fellowship Training with Practice Patterns for Molecular Pathologists: A Report of the Association for Molecular Pathology Training and Education Committee.
The Journal of molecular diagnostics : JMD.
2022
Review
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Times cited: 2 -
Image analysis reveals molecularly distinct patterns of TILs in NSCLC associated with treatment outcome.
NPJ precision oncology.
2022
Academic Article
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Times cited: 126 -
Spatial interplay patterns of cancer nuclei and tumor-infiltrating lymphocytes (TILs) predict clinical benefit for immune checkpoint inhibitors.
Science advances.
2022
Academic Article
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Times cited: 9 -
System-wide transcriptome damage and tissue identity loss in COVID-19 patients.
Cell reports. Medicine.
2022
Academic Article
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Times cited: 13 -
Machine Learning Highlights Downtrending of COVID-19 Patients with a Distinct Laboratory Profile.
Health data science.
2021
Academic Article
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Times cited: 147 -
Next-Generation Sequencing of Cell-Free DNA Extracted From Pleural Effusion Supernatant: Applications and Challenges.
Frontiers in medicine.
2021
Academic Article
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Times cited: 2 -
Interpretative differences of combined cytogenetic and molecular profiling highlights differences between MRC and ELN classifications of AML.
Cancer genetics.
2021
Academic Article
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Times cited: 2 -
Early introductions and transmission of SARS-CoV-2 variant B.1.1.7 in the United States.
Cell.
2021
Academic Article
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Times cited: 58 -
Shotgun transcriptome, spatial omics, and isothermal profiling of SARS-CoV-2 infection reveals unique host responses, viral diversification, and drug interactions.
Nature communications.
2021
Academic Article
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Times cited: 67 - Early introductions and community transmission of SARS-CoV-2 variant B.1.1.7 in the United States. medRxiv : the preprint server for health sciences. 2021 Article GET IT
- Systemic Tissue and Cellular Disruption from SARS-CoV-2 Infection revealed in COVID-19 Autopsies and Spatial Omics Tissue Maps. bioRxiv : the preprint server for biology. 2021 Article GET IT
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Rapid Implementation of Severe Acute Respiratory Syndrome Coronavirus 2 Emergency Use Authorization RT-PCR Testing and Experience at an Academic Medical Institution.
The Journal of molecular diagnostics : JMD.
2020
Academic Article
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Times cited: 2 -
Routine Laboratory Blood Tests Predict SARS-CoV-2 Infection Using Machine Learning.
Clinical chemistry.
2020
Academic Article
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Times cited: 62 -
Clinical Performance of SARS-CoV-2 Molecular Tests.
Journal of clinical microbiology.
2020
Academic Article
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Times cited: 66 -
Comparison of Two High-Throughput Reverse Transcription-PCR Systems for the Detection of Severe Acute Respiratory Syndrome Coronavirus 2.
Journal of clinical microbiology.
2020
Academic Article
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Times cited: 43 - Shotgun Transcriptome and Isothermal Profiling of SARS-CoV-2 Infection Reveals Unique Host Responses, Viral Diversification, and Drug Interactions. bioRxiv : the preprint server for biology. 2020 Article GET IT
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Stable and discriminating radiomic predictor of recurrence in early stage non-small cell lung cancer: Multi-site study.
Lung cancer (Amsterdam, Netherlands).
2020
Academic Article
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Times cited: 23 -
CT derived radiomic score for predicting the added benefit of adjuvant chemotherapy following surgery in Stage I, II resectable Non-Small Cell Lung Cancer: a retrospective multi-cohort study for outcome prediction.
The Lancet. Digital health.
2020
Academic Article
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Times cited: 62 -
CT derived radiomic score for predicting the added benefit of adjuvant chemotherapy following surgery in stage I, II resectable non-small cell lung cancer: a retrospective multicohort study for outcome prediction.
The Lancet. Digital health.
2020
Academic Article
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Times cited: 62 -
Changes in CT Radiomic Features Associated with Lymphocyte Distribution Predict Overall Survival and Response to Immunotherapy in Non-Small Cell Lung Cancer.
Cancer immunology research.
2019
Academic Article
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Times cited: 127 - Longitudinal targeted next-generation sequencing in a patient with acute myeloid leukaemia. 2019 GET IT
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Classes of ITD Predict Outcomes in AML Patients Treated with FLT3 Inhibitors.
Clinical cancer research : an official journal of the American Association for Cancer Research.
2018
Academic Article
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Times cited: 10 -
Genomic heterogeneity of ALK fusion breakpoints in non-small-cell lung cancer.
Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc.
2018
Academic Article
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Times cited: 58 -
Hippocampus, perirhinal cortex, and complex visual discriminations in rats and humans.
Learning & memory (Cold Spring Harbor, N.Y.).
2015
Academic Article
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Times cited: 14 -
Effect of visual feedback on the occipital-parietal-motor network in Parkinson's disease with freezing of gait.
Frontiers in neurology.
2014
Academic Article
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Times cited: 417 -
Single-trial classification of gait and point movement preparation from human EEG.
Frontiers in neuroscience.
2013
Academic Article
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Times cited: 205 -
Charges in the hydrophobic interior of proteins.
Proceedings of the National Academy of Sciences of the United States of America.
2010
Academic Article
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Times cited: 169 -
Hydration of the folding transition state ensemble of a protein.
Biochemistry.
2006
Academic Article
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Times cited: 44