publication venue for
- AD-BERT: Using Pre-trained Language Model to Predict the Progression from Mild Cognitive Impairment to Alzheimer's Disease. 2023
- Representing and utilizing clinical textual data for real world studies: An OHDSI approach.. 142. 2023
- Trustworthy assertion classification through prompting.. 132. 2022
- CODER: Knowledge-infused cross-lingual medical term embedding for term normalization.. 126. 2022
- A predictive model of clinical deterioration among hospitalized COVID-19 patients by harnessing hospital course trajectories.. 118. 2021
- Critical carE Database for Advanced Research (CEDAR): An automated method to support intensive care units with electronic health record data.. 118. 2021
- Extracting and classifying diagnosis dates from clinical notes: A case study.. 110. 2020
- Identifying sub-phenotypes of acute kidney injury using structured and unstructured electronic health record data with memory networks.. 102. 2020
- Developing a FHIR-based EHR phenotyping framework: A case study for identification of patients with obesity and multiple comorbidities from discharge summaries.. 99. 2019
- Association networks in a matched case-control design - Co-occurrence patterns of preexisting chronic medical conditions in patients with major depression versus their matched controls.. 87. 2018
- A scalable method for supporting multiple patient cohort discovery projects using i2b2.. 84. 2018
- A study of generalizability of recurrent neural network-based predictive models for heart failure onset risk using a large and heterogeneous EHR data set.. 84. 2018
- Developing a data element repository to support EHR-driven phenotype algorithm authoring and execution.. 62. 2016
- Developing EHR-driven heart failure risk prediction models using CPXR(Log) with the probabilistic loss function.. 60. 2016
- Paving the COWpath: Learning and visualizing clinical pathways from electronic health record data.. 58. 2015
- Mining and exploring care pathways from electronic medical records with visual analytics.. 56. 2015
- Improving patient prostate cancer risk assessment: Moving from static, globally-applied to dynamic, practice-specific risk calculators.. 56. 2015
- Adaptive semi-supervised recursive tree partitioning: The ART towards large scale patient indexing in personalized healthcare.. 55. 2015
- Towards actionable risk stratification: a bilinear approach.. 53. 2014
- Associating co-authorship patterns with publications in high-impact journals.. 52. 2014
- Design patterns for the development of electronic health record-driven phenotype extraction algorithms.. 51. 2014
- Exploring the associations between drug side-effects and therapeutic indications.. 51. 2014
- Automatic generation of investigator bibliographies for institutional research networking systems.. 51. 2014
- A methodology for interactive mining and visual analysis of clinical event patterns using electronic health record data.. 48. 2014
- Disambiguation of PharmGKB drug-disease relations with NDF-RT and SPL.. 46. 2013
- Harmonization and semantic annotation of data dictionaries from the Pharmacogenomics Research Network: a case study.. 46. 2012
- Terminology representation guidelines for biomedical ontologies in the semantic web notations.. 46. 2012
- Cross-terminology mapping challenges: a demonstration using medication terminological systems.. 45. 2012
- Building a robust, scalable and standards-driven infrastructure for secondary use of EHR data: the SHARPn project.. 45. 2012
- In search of common ground in handoff documentation in an Intensive Care Unit.. 45. 2011
- Gene pathways and subnetworks distinguish between major glioma subtypes and elucidate potential underlying biology.. 43. 2010
- Formalizing ICD coding rules using Formal Concept Analysis.. 42. 2009
- An image score inference system for RNAi genome-wide screening based on fuzzy mixture regression modeling.. 42. 2008
- Comparison of reversible-jump Markov-chain-Monte-Carlo learning approach with other methods for missing enzyme identification.. 41. 2007
- Workflow modeling in critical care: piecing together your own puzzle.. 40. 2006
- A computerized cellular imaging system for high content analysis in Monastrol suppressor screens.. 39. 2005
- Designing the design phase of critical care devices: a cognitive approach.. 38. 2005
- Decisions about critical events in device-related scenarios as a function of expertise.. 38. 2004
- Design and implementation of the GLIF3 guideline execution engine.. 37. 2004
- Cancer classification and prediction using logistic regression with Bayesian gene selection.. 37. 2004
- A cognitive taxonomy of medical errors.. 37. 2004
- GLIF3: a representation format for sharable computer-interpretable clinical practice guidelines.. 37. 2004
- Sharable representation of clinical guidelines in GLIF: relationship to the Arden Syntax.. 34. 2001
- Toward a representation format for sharable clinical guidelines.. 34. 2001
- The United Hospital Fund meeting on evaluating health information exchange. 2007
- Novel informatics approaches to COVID-19 Research: From methods to applications.. 129. 2022
- Temporal biomedical data analytics.. 90. 2019
- New JBI policy emphasizes substantive, practical methodological innovations for biomedical privacy and security papers.. 82. 2018
- Letters to the Editor.. 79. 2018
- JBI moves to new publishing models.. 53. 2015
- New JBI emphasis on translational bioinformatics.. 42. 2009
- CPOE and the facilitation of medication errors.. 38. 2005
- Deep representation learning of patient data from Electronic Health Records (EHR): A systematic review. 2020
- Navigation in the electronic health record: A review of the safety and usability literature. 2017
- Content overlap in nurse and physician handoff artifacts and the potential role of electronic health records: a systematic review. 2011
- Cognitive and learning sciences in biomedical and health instructional design: A review with lessons for biomedical informatics education. 2008
- Health information technology and health information exchange in New York State: new initiatives in implementation and evaluation. 2007
- Redesigning electronic health record systems to support public health. 2007
- Graph theoretic modeling of large-scale semantic networks. 2005
- Methods of cognitive analysis to support the design and evaluation of biomedical systems: the case of clinical practice guidelines. 2001