Ensembl 2014. Academic Article uri icon

Overview

abstract

  • Ensembl (http://www.ensembl.org) creates tools and data resources to facilitate genomic analysis in chordate species with an emphasis on human, major vertebrate model organisms and farm animals. Over the past year we have increased the number of species that we support to 77 and expanded our genome browser with a new scrollable overview and improved variation and phenotype views. We also report updates to our core datasets and improvements to our gene homology relationships from the addition of new species. Our REST service has been extended with additional support for comparative genomics and ontology information. Finally, we provide updated information about our methods for data access and resources for user training.

authors

  • Flicek, Paul
  • Amode, M Ridwan
  • Barrell, Daniel
  • Beal, Kathryn
  • Billis, Konstantinos
  • Brent, Simon
  • Carvalho-Silva, Denise
  • Clapham, Peter
  • Coates, Guy
  • Fitzgerald, Stephen
  • Gil, Laurent
  • Girón, Carlos García
  • Gordon, Leo
  • Hourlier, Thibaut
  • Hunt, Sarah
  • Johnson, Nathan
  • Juettemann, Thomas
  • Kähäri, Andreas K
  • Keenan, Stephen
  • Kulesha, Eugene
  • Martin, Fergal J
  • Maurel, Thomas
  • McLaren, William M
  • Murphy, Daniel N
  • Nag, Rishi
  • Overduin, Bert
  • Pignatelli, Miguel
  • Pritchard, Bethan
  • Pritchard, Emily
  • Riat, Harpreet S
  • Ruffier, Magali
  • Sheppard, Daniel
  • Taylor, Kieron
  • Thormann, Anja
  • Trevanion, Stephen J
  • Vullo, Alessandro
  • Wilder, Steven P
  • Wilson, Mark
  • Zadissa, Amonida
  • Aken, Bronwen L
  • Birney, Ewan
  • Cunningham, Fiona
  • Harrow, Jennifer
  • Herrero, Javier
  • Hubbard, Tim J P
  • Kinsella, Rhoda
  • Muffato, Matthieu
  • Parker, Anne
  • Spudich, Giulietta
  • Yates, Andy
  • Zerbino, Daniel R
  • Searle, Stephen M J

publication date

  • December 6, 2013

Research

keywords

  • Databases, Genetic
  • Genomics

Identity

PubMed Central ID

  • PMC3964975

Scopus Document Identifier

  • 84891768365

Digital Object Identifier (DOI)

  • 10.1093/nar/gkt1196

PubMed ID

  • 24316576

Additional Document Info

volume

  • 42

issue

  • Database issue