selected publications
- Modeling tissue-specific breakpoint proximity of structural variations from whole-genomes to identify cancer drivers. Nature communications. 2022 Academic Article GET IT
- Enhancing Recovery After Major Bladder Cancer Surgery: Comprehensive Review and Assessment of Application of the Enhanced Recovery After Surgery Guidelines. European urology focus. 2022 Review GET IT
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Chromatin profiles classify castration-resistant prostate cancers suggesting therapeutic targets.
Science (New York, N.Y.).
2022
Academic Article
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Times cited: 22 -
Systems biology analysis of human genomes points to key pathways conferring spina bifida risk.
Proceedings of the National Academy of Sciences of the United States of America.
2021
Academic Article
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Times cited: 5 -
CNCDatabase: a database of non-coding cancer drivers.
Nucleic acids research.
2021
Academic Article
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Times cited: 7 -
DeepMILO: a deep learning approach to predict the impact of non-coding sequence variants on 3D chromatin structure.
Genome biology.
2020
Academic Article
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Times cited: 22 -
Passenger Mutations in More Than 2,500 Cancer Genomes: Overall Molecular Functional Impact and Consequences.
Cell.
2020
Academic Article
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Times cited: 56 -
Analyses of non-coding somatic drivers in 2,658 cancer whole genomes.
Nature.
2020
Academic Article
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Times cited: 261 -
Cancer LncRNA Census reveals evidence for deep functional conservation of long noncoding RNAs in tumorigenesis.
Communications biology.
2020
Academic Article
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Times cited: 112 -
Combined burden and functional impact tests for cancer driver discovery using DriverPower.
Nature communications.
2020
Academic Article
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Times cited: 23 -
Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing.
Nature genetics.
2020
Academic Article
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Times cited: 266 -
Disruption of chromatin folding domains by somatic genomic rearrangements in human cancer.
Nature genetics.
2020
Academic Article
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Times cited: 122 -
Genomic footprints of activated telomere maintenance mechanisms in cancer.
Nature communications.
2020
Academic Article
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Times cited: 57 -
High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterations.
Nature communications.
2020
Academic Article
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Times cited: 33 -
Integrative pathway enrichment analysis of multivariate omics data.
Nature communications.
2020
Academic Article
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Times cited: 74 -
Pan-cancer analysis of whole genomes identifies driver rearrangements promoted by LINE-1 retrotransposition.
Nature genetics.
2020
Academic Article
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Times cited: 158 -
Pan-cancer analysis of whole genomes.
Nature.
2020
Academic Article
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Times cited: 1201 -
Pathway and network analysis of more than 2500 whole cancer genomes.
Nature communications.
2020
Academic Article
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Times cited: 47 -
Patterns of somatic structural variation in human cancer genomes.
Nature.
2020
Academic Article
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Times cited: 322 -
Identification of Cancer Drivers at CTCF Insulators in 1,962 Whole Genomes.
Cell systems.
2019
Academic Article
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Times cited: 39 -
Identification of novel prostate cancer drivers using RegNetDriver: a framework for integration of genetic and epigenetic alterations with tissue-specific regulatory network.
Genome biology.
2017
Academic Article
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Times cited: 23 -
Detailed analysis of inversions predicted between two human genomes: errors, real polymorphisms, and their origin and population distribution.
Human molecular genetics.
2017
Academic Article
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Times cited: 11 -
Validation and genotyping of multiple human polymorphic inversions mediated by inverted repeats reveals a high degree of recurrence.
PLoS genetics.
2014
Academic Article
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Times cited: 20 -
InvFEST, a database integrating information of polymorphic inversions in the human genome.
Nucleic acids research.
2013
Academic Article
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Times cited: 34 -
PeSV-Fisher: identification of somatic and non-somatic structural variants using next generation sequencing data.
PloS one.
2013
Academic Article
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Times cited: 15