selected publications
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Cell-specific expression of lung disease risk-related genes in the human small airway epithelium.
Respiratory research.
2020
Academic Article
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Times cited: 16 -
Expression of the SARS-CoV-2 ACE2 Receptor in the Human Airway Epithelium.
American journal of respiratory and critical care medicine.
2020
Academic Article
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Times cited: 157 -
Identifying novel associations in GWAS by hierarchical Bayesian latent variable detection of differentially misclassified phenotypes.
BMC bioinformatics.
2020
Academic Article
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Times cited: 3 -
Point of Care Exome Sequencing Reveals Allelic and Phenotypic Heterogeneity Underlying Mendelian disease in Qatar.
Human molecular genetics.
2019
Academic Article
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Times cited: 4 -
Role of KRAS in regulating normal human airway basal cell differentiation.
Respiratory research.
2019
Academic Article
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Times cited: 2 -
Exaggerated BMP4 signalling alters human airway basal progenitor cell differentiation to cigarette smoking-related phenotypes.
The European respiratory journal.
2019
Academic Article
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Times cited: 22 -
Ambient Pollution-related Reprogramming of the Human Small Airway Epithelial Transcriptome.
American journal of respiratory and critical care medicine.
2018
Academic Article
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Times cited: 13 -
Corneal confocal microscopy: Neurologic disease biomarker in Friedreich ataxia.
Annals of neurology.
2018
Academic Article
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Times cited: 13 -
Ontogeny and Biology of Human Small Airway Epithelial Club Cells.
American journal of respiratory and critical care medicine.
2018
Academic Article
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Times cited: 60 -
Whole-methylome analysis of circulating monocytes in acute diabetic Charcot foot reveals differentially methylated genes involved in the formation of osteoclasts.
Epigenomics.
2018
Academic Article
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Times cited: 3 -
Exome sequencing-based identification of novel type 2 diabetes risk allele loci in the Qatari population.
PloS one.
2018
Academic Article
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Times cited: 4 -
Inferring Identical-by-Descent Sharing of Sample Ancestors Promotes High-Resolution Relative Detection.
American journal of human genetics.
2018
Academic Article
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Times cited: 19 -
Point-of-care whole-exome sequencing of idiopathic male infertility.
Genetics in medicine : official journal of the American College of Medical Genetics.
2018
Academic Article
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Times cited: 41 -
Mandatory role of HMGA1 in human airway epithelial normal differentiation and post-injury regeneration.
Oncotarget.
2018
Academic Article
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Times cited: 7 -
Whole-exome sequencing identifies common and rare variant metabolic QTLs in a Middle Eastern population.
Nature communications.
2018
Academic Article
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Times cited: 41 -
XX Disorder of Sex Development is associated with an insertion on chromosome 9 and downregulation of RSPO1 in dogs (Canis lupus familiaris).
PloS one.
2017
Academic Article
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Times cited: 13 -
Benchmarking Relatedness Inference Methods with Genome-Wide Data from Thousands of Relatives.
Genetics.
2017
Academic Article
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Times cited: 45 -
An independent component analysis confounding factor correction framework for identifying broad impact expression quantitative trait loci.
PLoS computational biology.
2017
Academic Article
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Times cited: 7 -
Waterpipe smoking induces epigenetic changes in the small airway epithelium.
PloS one.
2017
Academic Article
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Times cited: 26 -
Rare Synaptogenesis-Impairing Mutations in SLITRK5 Are Associated with Obsessive Compulsive Disorder.
PloS one.
2017
Academic Article
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Times cited: 23 -
Pulmonary Abnormalities in Young, Light-Use Waterpipe (Hookah) Smokers.
American journal of respiratory and critical care medicine.
2016
Academic Article
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Times cited: 21 -
Correction: Type 2 Diabetes Risk Allele Loci in the Qatari Population.
PloS one.
2016
Article
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Times cited: 20 -
Persistence of circulating endothelial microparticles in COPD despite smoking cessation.
Thorax.
2016
Academic Article
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Times cited: 37 -
Type 2 Diabetes Risk Allele Loci in the Qatari Population.
PloS one.
2016
Academic Article
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Times cited: 20 -
The Qatar genome: a population-specific tool for precision medicine in the Middle East.
Human genome variation.
2016
Academic Article
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Times cited: 74 -
Anti-hIgE gene therapy of peanut-induced anaphylaxis in a humanized murine model of peanut allergy.
The Journal of allergy and clinical immunology.
2016
Academic Article
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Times cited: 18 -
Progression to COPD in smokers with normal spirometry/low DLCO using different methods to determine normal levels.
The European respiratory journal.
2016
Letter
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Times cited: 3 -
Corrigendum: Open access resources for genome-wide association mapping in rice.
Nature communications.
2016
Article
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Times cited: 2 -
POU2AF1 Functions in the Human Airway Epithelium To Regulate Expression of Host Defense Genes.
Journal of immunology (Baltimore, Md. : 1950).
2016
Academic Article
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Times cited: 32 -
Dissection of the genetic architecture of rice resistance to the blast fungus Magnaporthe oryzae.
Molecular plant pathology.
2016
Academic Article
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Times cited: 53 -
Genome-wide association and high-resolution phenotyping link Oryza sativa panicle traits to numerous trait-specific QTL clusters.
Nature communications.
2016
Academic Article
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Times cited: 116 -
Open access resources for genome-wide association mapping in rice.
Nature communications.
2016
Academic Article
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Times cited: 298 -
Cigarette Smoking Induces Changes in Airway Epithelial Expression of Genes Associated with Monogenic Lung Disorders.
American journal of respiratory and critical care medicine.
2016
Letter
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Times cited: 7 -
Indigenous Arabs are descendants of the earliest split from ancient Eurasian populations.
Genome research.
2016
Academic Article
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Times cited: 62 -
Risk of COPD with obstruction in active smokers with normal spirometry and reduced diffusion capacity.
The European respiratory journal.
2015
Academic Article
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Times cited: 83 -
Copy number variations in the genome of the Qatari population.
BMC genomics.
2015
Academic Article
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Times cited: 8 -
Persistence of smoking-induced dysregulation of miRNA expression in the small airway epithelium despite smoking cessation.
PloS one.
2015
Academic Article
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Times cited: 56 -
Airway Basal stem/progenitor cells have diminished capacity to regenerate airway epithelium in chronic obstructive pulmonary disease.
American journal of respiratory and critical care medicine.
2014
Letter
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Times cited: 70 -
Smoking accelerates aging of the small airway epithelium.
Respiratory research.
2014
Academic Article
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Times cited: 57 -
lrgpr: interactive linear mixed model analysis of genome-wide association studies with composite hypothesis testing and regression diagnostics in R.
Bioinformatics (Oxford, England).
2014
Academic Article
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Times cited: 8 -
Mesenchymal cell interaction with ovarian cancer cells induces a background dependent pro-metastatic transcriptomic profile.
Journal of translational medicine.
2014
Academic Article
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Times cited: 25 -
Smoking dysregulates the human airway basal cell transcriptome at COPD risk locus 19q13.2.
PloS one.
2014
Academic Article
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Times cited: 56 -
HEFT: eQTL analysis of many thousands of expressed genes while simultaneously controlling for hidden factors.
Bioinformatics (Oxford, England).
2013
Academic Article
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Times cited: 17 -
Vitamin D-responsive SGPP2 variants associated with lung cell expression and lung function.
BMC medical genetics.
2013
Academic Article
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Times cited: 7 -
Exome sequencing identifies potential risk variants for Mendelian disorders at high prevalence in Qatar.
Human mutation.
2013
Academic Article
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Times cited: 41 -
IQCB1 and PDE6B mutations cause similar early onset retinal degenerations in two closely related terrier dog breeds.
Investigative ophthalmology & visual science.
2013
Academic Article
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Times cited: 29 -
Prevalence of the apolipoprotein E Arg145Cys dyslipidemia at-risk polymorphism in African-derived populations.
The American journal of cardiology.
2013
Academic Article
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Times cited: 12 -
High correlation of the response of upper and lower lobe small airway epithelium to smoking.
PloS one.
2013
Academic Article
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Times cited: 5 -
Spectrum of ocular manifestations in CLN2-associated batten (Jansky-Bielschowsky) disease correlate with advancing age and deteriorating neurological function.
PloS one.
2013
Academic Article
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Times cited: 32 -
Differential expression of vitamin E and selenium-responsive genes by disease severity in chronic obstructive pulmonary disease.
COPD.
2013
Academic Article
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Times cited: 8 -
PUMA: a unified framework for penalized multiple regression analysis of GWAS data.
PLoS computational biology.
2013
Academic Article
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Times cited: 30 -
Lung adenocarcinoma subtypes based on expression of human airway basal cell genes.
The European respiratory journal.
2013
Academic Article
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Times cited: 30 -
Safety of direct cardiac administration of AdVEGF-All6A+, a replication-deficient adenovirus vector cDNA/genomic hybrid expressing all three major isoforms of human vascular endothelial growth factor, to the ischemic myocardium of rats.
Human gene therapy. Clinical development.
2013
Academic Article
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Times cited: 9 -
Exome sequencing of only seven Qataris identifies potentially deleterious variants in the Qatari population.
PloS one.
2012
Academic Article
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Times cited: 16 -
Airway epithelial expression of TLR5 is downregulated in healthy smokers and smokers with chronic obstructive pulmonary disease.
Journal of immunology (Baltimore, Md. : 1950).
2012
Academic Article
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Times cited: 25 -
PCAdmix: principal components-based assignment of ancestry along each chromosome in individuals with admixed ancestry from two or more populations.
Human biology.
2012
Academic Article
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Times cited: 120 -
Four loci explain 83% of size variation in the horse.
PloS one.
2012
Academic Article
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Times cited: 144 -
Inferring genome-wide patterns of admixture in Qataris using fifty-five ancestral populations.
BMC genetics.
2012
Academic Article
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Times cited: 42 -
Empirical Bayes conditional independence graphs for regulatory network recovery.
Bioinformatics (Oxford, England).
2012
Academic Article
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Times cited: 5 -
Genes associated with MUC5AC expression in small airway epithelium of human smokers and non-smokers.
BMC medical genomics.
2012
Academic Article
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Times cited: 44 -
AAVrh.10-mediated expression of an anti-cocaine antibody mediates persistent passive immunization that suppresses cocaine-induced behavior.
Human gene therapy.
2012
Academic Article
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Times cited: 38 -
Patterns of ancestry, signatures of natural selection, and genetic association with stature in Western African pygmies.
PLoS genetics.
2012
Academic Article
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Times cited: 97 -
Mouse obesity network reconstruction with a variational Bayes algorithm to employ aggressive false positive control.
BMC bioinformatics.
2012
Academic Article
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Times cited: 21 -
RNA-Seq quantification of the human small airway epithelium transcriptome.
BMC genomics.
2012
Academic Article
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Times cited: 94 -
Persistent suppression of ocular neovascularization with intravitreal administration of AAVrh.10 coding for bevacizumab.
Human gene therapy.
2011
Academic Article
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Times cited: 20 -
Genome-wide association mapping reveals a rich genetic architecture of complex traits in Oryza sativa.
Nature communications.
2011
Academic Article
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Times cited: 986 -
Biologic phenotyping of the human small airway epithelial response to cigarette smoking.
PloS one.
2011
Academic Article
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Times cited: 60 - Fast, exact linkage analysis for categorical traits on arbitrary pedigree designs. Genetic epidemiology. 2011 Academic Article GET IT
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Circulating endothelial microparticles as a measure of early lung destruction in cigarette smokers.
American journal of respiratory and critical care medicine.
2011
Academic Article
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Times cited: 180 -
Glutathione S-transferase copy number variation alters lung gene expression.
The European respiratory journal.
2011
Academic Article
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Times cited: 17 -
Modulation of cystatin A expression in human airway epithelium related to genotype, smoking, COPD, and lung cancer.
Cancer research.
2011
Academic Article
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Times cited: 33 -
Cocaine analog coupled to disrupted adenovirus: a vaccine strategy to evoke high-titer immunity against addictive drugs.
Molecular therapy : the journal of the American Society of Gene Therapy.
2011
Academic Article
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Times cited: 53 -
Gene expression network reconstruction by convex feature selection when incorporating genetic perturbations.
PLoS computational biology.
2010
Academic Article
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Times cited: 53 -
Bayesian linkage analysis of categorical traits for arbitrary pedigree designs.
PloS one.
2010
Academic Article
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Times cited: 4 -
An ADAM9 mutation in canine cone-rod dystrophy 3 establishes homology with human cone-rod dystrophy 9.
Molecular vision.
2010
Academic Article
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Times cited: 35 -
Threshold of biologic responses of the small airway epithelium to low levels of tobacco smoke.
American journal of respiratory and critical care medicine.
2010
Academic Article
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Times cited: 68 -
Whole-genome SNP association in the horse: identification of a deletion in myosin Va responsible for Lavender Foal Syndrome.
PLoS genetics.
2010
Academic Article
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Times cited: 89 -
A variational Bayes algorithm for fast and accurate multiple locus genome-wide association analysis.
BMC bioinformatics.
2010
Academic Article
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Times cited: 69 -
A genome-wide linkage scan in German shepherd dogs localizes canine platelet procoagulant deficiency (Scott syndrome) to canine chromosome 27.
Gene.
2010
Academic Article
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Times cited: 15 -
Trachea epithelium as a "canary" for cigarette smoking-induced biologic phenotype of the small airway epithelium.
Clinical and translational science.
2009
Academic Article
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Times cited: 14 -
Brain-derived neurotrophic factor as a model system for examining gene by environment interactions across development.
Neuroscience.
2009
Review
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Times cited: 119 -
Coordinate control of expression of Nrf2-modulated genes in the human small airway epithelium is highly responsive to cigarette smoking.
Molecular medicine (Cambridge, Mass.).
2009
Academic Article
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Times cited: 74 -
Development and use of DNA archives at veterinary teaching hospitals to investigate the genetic basis of disease in dogs.
Journal of the American Veterinary Medical Association.
2009
Review
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Times cited: 12 -
Coordinated evolution of co-expressed gene clusters in the Drosophila transcriptome.
BMC evolutionary biology.
2008
Academic Article
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Times cited: 25 -
Quantitative trait loci for the circadian clock in Neurospora crassa.
Genetics.
2007
Academic Article
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Times cited: 11 -
Adaptive gene expression divergence inferred from population genomics.
PLoS genetics.
2007
Academic Article
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Times cited: 44 -
Developmental regulation of skull morphology II: ontogenetic dynamics of covariance.
Evolution & development.
2006
Academic Article
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Times cited: 66 -
The dimensionality of genetic variation for wing shape in Drosophila melanogaster.
Evolution; international journal of organic evolution.
2005
Academic Article
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Times cited: 161 -
Evolutionary genomics: codon bias and selection on single genomes.
Nature.
2005
Comment
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Times cited: 18 -
Naturally segregating quantitative trait loci affecting wing shape of Drosophila melanogaster.
Genetics.
2004
Academic Article
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Times cited: 59 -
Automated measurement of Drosophila wings.
BMC evolutionary biology.
2003
Academic Article
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Times cited: 133 -
Comparing G matrices: are common principal components informative?.
Genetics.
2003
Academic Article
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Times cited: 40 -
Interpretation of the results of common principal components analyses.
Evolution; international journal of organic evolution.
2002
Academic Article
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Times cited: 87 -
The test distribution of modularity statistics: a correction and clarification.
Genetics.
2001
Letter
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Times cited: 1 -
Is the genotype-phenotype map modular? A statistical approach using mouse quantitative trait loci data.
Genetics.
2000
Academic Article
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Times cited: 121 -
Modeling the evolution of genetic architecture: A continuum of alleles model with pairwise AxA epistasis.
Journal of theoretical biology.
2000
Academic Article
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Times cited: 19 -
Hox cluster genomics in the horn shark, Heterodontus francisci.
Proceedings of the National Academy of Sciences of the United States of America.
2000
Academic Article
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Times cited: 95