selected publications
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Towards biological applications of nanophotonic tweezers.
Current opinion in chemical biology.
2019
Review
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Times cited: 15 -
Synergistic Coordination of Chromatin Torsional Mechanics and Topoisomerase Activity.
Cell.
2019
Academic Article
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Times cited: 32 -
High Trap Stiffness Microcylinders for Nanophotonic Trapping.
ACS applied materials & interfaces.
2019
Academic Article
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Times cited: 12 -
Molecular Highways-Navigating Collisions of DNA Motor Proteins.
Journal of molecular biology.
2018
Review
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Times cited: 8 -
Helicase promotes replication re-initiation from an RNA transcript.
Nature communications.
2018
Academic Article
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Times cited: 18 -
Single-Molecule Angular Optical Trapping for Studying Transcription Under Torsion.
Methods in molecular biology (Clifton, N.J.).
2018
Academic Article
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Times cited: 5 -
Mfd Dynamically Regulates Transcription via a Release and Catch-Up Mechanism.
Cell.
2017
Academic Article
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Times cited: 43 -
Nanophotonic trapping: precise manipulation and measurement of biomolecular arrays.
Wiley interdisciplinary reviews. Nanomedicine and nanobiotechnology.
2017
Review
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Times cited: 26 -
Tunable nanophotonic array traps with enhanced force and stability.
Optics express.
2017
Academic Article
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Times cited: 8 -
DNA looping mediates nucleosome transfer.
Nature communications.
2016
Academic Article
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Times cited: 22 -
Single-Molecule Optical-Trapping Techniques to Study Molecular Mechanisms of a Replisome.
Methods in enzymology.
2016
Academic Article
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Times cited: 8 -
Biocompatible and High Stiffness Nanophotonic Trap Array for Precise and Versatile Manipulation.
Nano letters.
2016
Academic Article
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Times cited: 20 -
DNA supercoiling during transcription.
Biophysical reviews.
2016
Academic Article
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Times cited: 72 -
The Chd1 chromatin remodeler can sense both entry and exit sides of the nucleosome.
Nucleic acids research.
2016
Academic Article
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Times cited: 21 -
T7 replisome directly overcomes DNA damage.
Nature communications.
2015
Academic Article
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Times cited: 40 -
Single-molecule perspectives on helicase mechanisms and functions.
Critical reviews in biochemistry and molecular biology.
2015
Review
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Times cited: 28 -
Dynamic regulation of transcription factors by nucleosome remodeling.
eLife.
2015
Academic Article
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Times cited: 62 -
DNA Y structure: a versatile, multidimensional single molecule assay.
Nano letters.
2014
Academic Article
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Times cited: 23 -
Nanophotonic trapping for precise manipulation of biomolecular arrays.
Nature nanotechnology.
2014
Academic Article
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Times cited: 119 -
Discovering the power of single molecules.
Cell.
2014
Review
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Times cited: 11 -
Super-resolution microscopy reveals decondensed chromatin structure at transcription sites.
Scientific reports.
2014
Academic Article
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Times cited: 37 -
Interplay between DNA supercoiling and transcription elongation.
Transcription.
2014
Academic Article
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Times cited: 34 -
Small molecule injection into single-cell C. elegans embryos via carbon-reinforced nanopipettes.
PloS one.
2013
Academic Article
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Times cited: 8 -
Single-molecule unzipping force analysis of HU-DNA complexes.
Chembiochem : a European journal of chemical biology.
2013
Academic Article
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Times cited: 14 -
Transcription under torsion.
Science (New York, N.Y.).
2013
Academic Article
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Times cited: 207 -
Torque measurement at the single-molecule level.
Annual review of biophysics.
2013
Review
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Times cited: 63 -
Torque modulates nucleosome stability and facilitates H2A/H2B dimer loss.
Nature communications.
2013
Academic Article
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Times cited: 94 -
Biochemistry. A DNA twist diffuses and hops.
Science (New York, N.Y.).
2012
Comment
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Times cited: 5 -
Electro-optofluidics: achieving dynamic control on-chip.
Optics express.
2012
Academic Article
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Times cited: 25 -
Unzipping single DNA molecules to study nucleosome structure and dynamics.
Methods in enzymology.
2012
Academic Article
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Times cited: 21 -
Recent advances in single molecule studies of nucleosomes.
Current opinion in structural biology.
2011
Review
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Times cited: 43 -
ATP-induced helicase slippage reveals highly coordinated subunits.
Nature.
2011
Academic Article
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Times cited: 79 -
Underwound DNA under tension: structure, elasticity, and sequence-dependent behaviors.
Physical review letters.
2011
Academic Article
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Times cited: 81 -
Direct measurements of torque during Holliday junction migration.
Biophysical journal.
2011
Letter
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Times cited: 14 -
A257T linker region mutant of T7 helicase-primase protein is defective in DNA loading and rescued by T7 DNA polymerase.
The Journal of biological chemistry.
2011
Academic Article
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Times cited: 15 -
Structure and Scm3-mediated assembly of budding yeast centromeric nucleosomes.
Nature communications.
2011
Academic Article
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Times cited: 93 -
Comparison of Pause Predictions of Two Sequence-Dependent Transcription Models.
Journal of statistical mechanics (Online).
2010
Academic Article
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Times cited: 6 -
Passive torque wrench and angular position detection using a single-beam optical trap.
Optics letters.
2010
Academic Article
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Times cited: 30 -
Synergistic action of RNA polymerases in overcoming the nucleosomal barrier.
Nature structural & molecular biology.
2010
Academic Article
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Times cited: 101 -
Discontinuities at the DNA supercoiling transition.
Physical review. E, Statistical, nonlinear, and soft matter physics.
2009
Academic Article
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Times cited: 31 -
Twist-stretch coupling and phase transition during DNA supercoiling.
Physical chemistry chemical physics : PCCP.
2009
Academic Article
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Times cited: 47 -
High-resolution dynamic mapping of histone-DNA interactions in a nucleosome.
Nature structural & molecular biology.
2009
Academic Article
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Times cited: 297 - A biophysicist marvels at the idea of grabbing microscopic particles with light by tweaking its phase. Nature. 2008 Academic Article GET IT
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Abrupt buckling transition observed during the plectoneme formation of individual DNA molecules.
Physical review letters.
2008
Academic Article
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Times cited: 161 -
Single-molecule studies reveal dynamics of DNA unwinding by the ring-shaped T7 helicase.
Cell.
2007
Academic Article
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Times cited: 199 -
Nanofabricated quartz cylinders for angular trapping: DNA supercoiling torque detection.
Nature methods.
2007
Academic Article
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Times cited: 139 -
Mechanochemical kinetics of transcription elongation.
Physical review letters.
2007
Academic Article
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Times cited: 64 -
Probing SWI/SNF remodeling of the nucleosome by unzipping single DNA molecules.
Nature structural & molecular biology.
2006
Academic Article
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Times cited: 86 -
Single-molecule analysis of RNA polymerase transcription.
Annual review of biophysics and biomolecular structure.
2006
Review
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Times cited: 99 -
Detection of high-affinity and sliding clamp modes for MSH2-MSH6 by single-molecule unzipping force analysis.
Molecular cell.
2005
Academic Article
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Times cited: 48 -
Detection of forces and displacements along the axial direction in an optical trap.
Biophysical journal.
2005
Academic Article
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Times cited: 44 -
Specific contributions of histone tails and their acetylation to the mechanical stability of nucleosomes.
Journal of molecular biology.
2004
Academic Article
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Times cited: 152 -
Sequence-dependent kinetic model for transcription elongation by RNA polymerase.
Journal of molecular biology.
2004
Academic Article
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Times cited: 125 -
A single-molecule technique to study sequence-dependent transcription pausing.
Biophysical journal.
2004
Academic Article
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Times cited: 45 -
Molecular mechanism of transcription inhibition by peptide antibiotic Microcin J25.
Molecular cell.
2004
Academic Article
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Times cited: 138 -
Optical torque wrench: angular trapping, rotation, and torque detection of quartz microparticles.
Physical review letters.
2004
Academic Article
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Times cited: 303 -
Use of optical trapping techniques to study single-nucleosome dynamics.
Methods in enzymology.
2004
Review
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Times cited: 20 -
Dynamic force spectroscopy of protein-DNA interactions by unzipping DNA.
Physical review letters.
2003
Academic Article
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Times cited: 77 -
Single molecule analysis of RNA polymerase elongation reveals uniform kinetic behavior.
Proceedings of the National Academy of Sciences of the United States of America.
2002
Academic Article
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Times cited: 156 -
Probing protein-DNA interactions by unzipping a single DNA double helix.
Biophysical journal.
2002
Academic Article
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Times cited: 111 -
Mechanical disruption of individual nucleosomes reveals a reversible multistage release of DNA.
Proceedings of the National Academy of Sciences of the United States of America.
2002
Academic Article
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Times cited: 392 -
Stretching of single collapsed DNA molecules.
Biophysical journal.
2000
Academic Article
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Times cited: 227 -
Manipulation of single molecules in biology.
Current opinion in biotechnology.
1999
Review
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Times cited: 37 -
Estimating the persistence length of a worm-like chain molecule from force-extension measurements.
Biophysical journal.
1999
Academic Article
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Times cited: 542 -
Force and velocity measured for single molecules of RNA polymerase.
Science (New York, N.Y.).
1998
Academic Article
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Times cited: 753 -
Stretching DNA with optical tweezers.
Biophysical journal.
1997
Academic Article
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Times cited: 1178 -
Transcription against an applied force.
Science (New York, N.Y.).
1995
Academic Article
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Times cited: 485