selected publications
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Three-dimensional growth of breast cancer cells potentiates the anti-tumor effects of unacylated ghrelin and AZP-531.
eLife.
2020
Academic Article
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Times cited: 5 - A comprehensive, multidisciplinary, precision medicine approach to discover effective therapy for an undiagnosed, progressive, fibroinflammatory disease. 2019 GET IT
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TOX is a critical regulator of tumour-specific T cell differentiation.
Nature.
2019
Academic Article
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Times cited: 495 -
Features of Circulating Parainfluenza Virus Required for Growth in Human Airway.
mBio.
2016
Academic Article
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Times cited: 15 -
Erratum to: Comprehensive evaluation of differential gene expression analysis methods for RNA-seq data.
Genome biology.
2015
Article
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Times cited: 476 -
Mining the Archives: A Cross-Platform Analysis of Gene Expression Profiles in Archival Formalin-Fixed Paraffin-Embedded Tissues.
Toxicological sciences : an official journal of the Society of Toxicology.
2015
Review
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Times cited: 29 -
Geospatial Resolution of Human and Bacterial Diversity with City-Scale Metagenomics.
Cell systems.
2015
Academic Article
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Times cited: 84 -
A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium.
Nature biotechnology.
2014
Academic Article
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Times cited: 625 -
Detecting and correcting systematic variation in large-scale RNA sequencing data.
Nature biotechnology.
2014
Academic Article
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Times cited: 120 -
Multi-platform assessment of transcriptome profiling using RNA-seq in the ABRF next-generation sequencing study.
Nature biotechnology.
2014
Academic Article
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Times cited: 154 -
A hybrid mechanism of action for BCL6 in B cells defined by formation of functionally distinct complexes at enhancers and promoters.
Cell reports.
2013
Academic Article
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Times cited: 134 -
An optimized algorithm for detecting and annotating regional differential methylation.
BMC bioinformatics.
2013
Academic Article
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Times cited: 88 -
Relapse-specific mutations in NT5C2 in childhood acute lymphoblastic leukemia.
Nature genetics.
2013
Academic Article
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Times cited: 228 -
Comprehensive evaluation of differential gene expression analysis methods for RNA-seq data.
Genome biology.
2013
Academic Article
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Times cited: 476 -
The non-human primate reference transcriptome resource (NHPRTR) for comparative functional genomics.
Nucleic acids research.
2012
Academic Article
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Times cited: 58 -
Comprehensive analysis of mRNA methylation reveals enrichment in 3' UTRs and near stop codons.
Cell.
2012
Academic Article
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Times cited: 2512 -
Standardizing the next generation of bioinformatics software development with BioHDF (HDF5).
Advances in experimental medicine and biology.
2010
Academic Article
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Times cited: 11 -
Sex-specific and lineage-specific alternative splicing in primates.
Genome research.
2009
Academic Article
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Times cited: 197 -
Genetic diagnosis by whole exome capture and massively parallel DNA sequencing.
Proceedings of the National Academy of Sciences of the United States of America.
2009
Academic Article
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Times cited: 1031