Batch mode generation of residue-based diagrams of proteins. Academic Article uri icon

Overview

abstract

  • SUMMARY: Residue-based diagrams of proteins are graphical representations that can be used in protein information systems. These diagrams make it possible to visually integrate different types of biological information. The approach has been used successfully for membrane proteins. We developed the Residue-based diagram generator to (i) make it possible to generate residue-based diagrams of proteins in a batch mode that is compatible with the needs of information system curators, (ii) allow the generation of residue-based diagrams for families of soluble proteins or domains. AVAILABILITY: Licensed. Royalty free licenses are granted to non-profit institutions for educational and research purposes. http://icb.mssm.edu/crt/RbDg/index.xml

publication date

  • September 22, 2003

Research

keywords

  • Computer Graphics
  • Computing Methodologies
  • Databases, Protein
  • Models, Molecular
  • Proteins
  • Sequence Analysis, Protein
  • User-Computer Interface

Identity

Scopus Document Identifier

  • 0141729450

Digital Object Identifier (DOI)

  • 10.1093/bioinformatics/btg236

PubMed ID

  • 14512361

Additional Document Info

volume

  • 19

issue

  • 14