Journal of clinical microbiology

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False-Positive Results for Human Immunodeficiency Virus Type 1 Nucleic Acid Amplification Testing in Chimeric Antigen Receptor T Cell Therapy. 2019
The Brief Case: Disseminated Mycobacterium haemophilum Infection in a Kidney Transplant Recipient. 2017
The Brief Case: Too Beta To Be a "B". 2017
Candida quercitrusa Candidemia in a 6-Year-Old Child. 2015
Septic arthritis of a native knee joint due to Corynebacterium striatum. 2014
Endocarditis caused by Rhodotorula infection. 2013
Disseminated adenovirus infection in cancer patients presenting with focal pulmonary consolidation. 2013
Novel fastidious, partially acid-fast, anaerobic Gram-positive bacillus associated with abscess formation and recovered from multiple medical centers. 2013
Septic shock caused by Klebsiella pneumoniae carbapenemase-producing Enterobacter gergoviae in a neutropenic patient with leukemia. 2013
Capnocytophaga lung abscess in a patient with metastatic neuroendocrine tumor. 2011
Heterogeneously vancomycin-resistant Staphylococcus epidermidis strain causing recurrent peritonitis in a dialysis patient during vancomycin therapy. 1999
Demonstration of persistence of Salmonella typhimurium in an AIDS patient by molecular methods. 1994
Endocarditis associated with Comamonas acidovorans. 1990
Liver infection caused by Coniothyrium fuckelii in a patient with acute myelogenous leukemia. 1987
Serratia plymuthica sepsis associated with infection of central venous catheter. 1987
Neisseria meningitidis serogroup 29E (Z') septicemia in a patient with far advanced multiple myeloma (plasma cell leukemia). 1985
Comparison between Perianal Swab and Stool Specimens for Detecting Colonization with Extended-Spectrum Beta-Lactamase-Producing and Fluoroquinolone-Resistant Enterobacterales.. 60. 2022
Partial ORF1ab Gene Target Failure with Omicron BA.2.12.1.. 60. 2022
Prevalence and Characterization of the Cefazolin Inoculum Effect in North American Methicillin-Susceptible Staphylococcus aureus Isolates.. 60. 2022
Erratum for Marrero Rolon et al., "Clinical Evaluation of a Real-Time PCR Assay for Simultaneous Detection of Helicobacter pylori and Genotypic Markers of Clarithromycin Resistance Directly from Stool".. 60. 2022
Manual Reading of Sensititre Broth Microdilution System Panels Improves Accuracy of Susceptibility Reporting for Polymyxin Antibiotics.. 59. 2021
Clinical Evaluation of a Real-Time PCR Assay for Simultaneous Detection of Helicobacter pylori and Genotypic Markers of Clarithromycin Resistance Directly from Stool.. 59. 2021
Evaluating the Rapid Emergence of Daptomycin Resistance in Corynebacterium: a Multicenter Study.. 59. 2021
Clinical Performance of the Point-of-Care cobas Liat for Detection of SARS-CoV-2 in 20 Minutes: a Multicenter Study.. 59. 2021
Evaluation of a Combined Multilocus Sequence Typing and Whole-Genome Sequencing Two-Step Algorithm for Routine Typing of Clostridioides difficile.. 59. 2021
Evaluation of Surrogate Tests for the Presence of mecA-Mediated Methicillin Resistance in Staphylococcus capitis, Staphylococcus haemolyticus, Staphylococcus hominis, and Staphylococcus warneri.. 59. 2020
Bacteremia and Blood Culture Utilization during COVID-19 Surge in New York City.. 58. 2020
Clinical Performance of SARS-CoV-2 Molecular Tests.. 58. 2020
Comparison of Two High-Throughput Reverse Transcription-PCR Systems for the Detection of Severe Acute Respiratory Syndrome Coronavirus 2.. 58. 2020
Evaluation of NG-Test Carba 5 for Rapid Phenotypic Detection and Differentiation of Five Common Carbapenemase Families: Results of a Multicenter Clinical Evaluation.. 58. 2020
Human Infections Caused by Clonally Related African Clade (Clade III) Strains of Candida auris in the Greater Houston Region.. 58. 2020
Reduced In Vitro Susceptibility of Streptococcus pyogenes to β-Lactam Antibiotics Associated with Mutations in the pbp2x Gene Is Geographically Widespread.. 58. 2020
Blood-Modified Carbapenem Inactivation Method: a Phenotypic Method for Detecting Carbapenemase-Producing Enterobacteriaceae Directly from Positive Blood Culture Broths.. 58. 2020
Evaluation of Oxacillin and Cefoxitin Disk Diffusion and Microbroth Dilution Methods for Detecting mecA-Mediated β-Lactam Resistance in Contemporary Staphylococcus epidermidis Isolates.. 57. 2019
Performance of Five Commercial Identification Platforms for Identification of Staphylococcus delphini.. 57. 2019
EDTA-Modified Carbapenem Inactivation Method: a Phenotypic Method for Detecting Metallo-β-Lactamase-Producing Enterobacteriaceae.. 57. 2019
Improved Performance of a Rapid Immunochromatographic Assay for Detection of PBP2a in Non-Staphylococcus aureus Staphylococcal Species.. 57. 2019
Using Machine Learning To Predict Antimicrobial MICs and Associated Genomic Features for Nontyphoidal Salmonella.. 57. 2019
Identification and Characterization of Clostridium difficile Sequence Type 37 Genotype by Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry.. 56. 2018
Development of Envelope Protein Antigens To Serologically Differentiate Zika Virus Infection from Dengue Virus Infection.. 56. 2018
Evaluation of Oxacillin and Cefoxitin Disk Diffusion and MIC Breakpoints Established by the Clinical and Laboratory Standards Institute for Detection of mecA-Mediated Oxacillin Resistance in Staphylococcus schleiferi.. 56. 2018
Closing the Brief Case: Disseminated Mycobacterium haemophilum Infection in a Kidney Transplant Recipient.. 56. 2017
Multicenter Evaluation of the Modified Carbapenem Inactivation Method and the Carba NP for Detection of Carbapenemase-Producing Pseudomonas aeruginosa and Acinetobacter baumannii.. 56. 2017
Multiplex Reverse Transcription-PCR for Simultaneous Surveillance of Influenza A and B Viruses.. 55. 2017
Closing the Brief Case: Too Beta To Be a "B".. 55. 2017
Multicenter Performance Assessment of Carba NP Test.. 55. 2017
Modified Carbapenem Inactivation Method for Phenotypic Detection of Carbapenemase Production among Enterobacteriaceae.. 55. 2017
Detection of Antigenic Variants of Subtype H3 Swine Influenza A Viruses from Clinical Samples.. 55. 2017
Evaluation of Pyrrolidonyl Arylamidase Activity in Staphylococcus delphini.. 55. 2016
Impact of Early Detection of Respiratory Viruses by Multiplex PCR Assay on Clinical Outcomes in Adult Patients.. 54. 2016
In Vitro Antimicrobial Susceptibility of Staphylococcus pseudintermedius Isolates of Human and Animal Origin.. 54. 2016
Evaluation of the FilmArray Blood Culture Identification Panel: Results of a Multicenter Controlled Trial.. 54. 2016
Comparison of Multilocus Sequence Typing and the Xpert C. difficile/Epi Assay for Identification of Clostridium difficile 027/NAP1/BI.. 54. 2015
Evaluation of an Immunochromatographic Assay for Rapid Detection of Penicillin-Binding Protein 2a in Human and Animal Staphylococcus intermedius Group, Staphylococcus lugdunensis, and Staphylococcus schleiferi Clinical Isolates.. 54. 2015
Evaluation of Oxacillin and Cefoxitin Disk and MIC Breakpoints for Prediction of Methicillin Resistance in Human and Veterinary Isolates of Staphylococcus intermedius Group.. 54. 2015
Evaluation of Remel Spectra CRE Agar for Detection of Carbapenem-Resistant Bacteria from Rectal Swabs Obtained from Residents of a Long-Term-Care Facility.. 53. 2015
Molecular Types of Methicillin-Resistant Staphylococcus aureus and Methicillin-Sensitive S. aureus Strains Causing Skin and Soft Tissue Infections and Nasal Colonization, Identified in Community Health Centers in New York City.. 53. 2015
Reducing Unnecessary and Duplicate Ordering for Ovum and Parasite Examinations and Clostridium difficile PCR in Immunocompromised Patients by Using an Alert at the Time of Request in the Order Management System.. 53. 2015
Assessment of Reproducibility of Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry for Bacterial and Yeast Identification.. 53. 2015
Bacteremia caused by Arcobacter butzleri in an immunocompromised host.. 53. 2015
Monitoring of cytomegalovirus viral loads by two molecular assays in whole-blood and plasma samples from hematopoietic stem cell transplant recipients.. 53. 2015
High-throughput mycobacterial interspersed repetitive-unit-variable-number tandem-repeat genotyping for Mycobacterium tuberculosis epidemiological studies.. 53. 2014
Clinical laboratory response to a mock outbreak of invasive bacterial infections: a preparedness study.. 52. 2014
Analysis of culture-dependent versus culture-independent techniques for identification of bacteria in clinically obtained bronchoalveolar lavage fluid.. 52. 2014
Real-time cellular analysis coupled with a specimen enrichment accurately detects and quantifies Clostridium difficile toxins in stool.. 52. 2014
Economic evaluation of laboratory testing strategies for hospital-associated Clostridium difficile infection.. 52. 2013
Multicenter evaluation of the Vitek MS matrix-assisted laser desorption ionization-time of flight mass spectrometry system for identification of Gram-positive aerobic bacteria.. 51. 2013
Multicenter study evaluating the Vitek MS system for identification of medically important yeasts.. 51. 2013
Use of Luminex MagPlex magnetic microspheres for high-throughput spoligotyping of Mycobacterium tuberculosis isolates in Port-au-Prince, Haiti.. 51. 2013
A genomic day in the life of a clinical microbiology laboratory.. 51. 2013
A real-time PCR assay for rapid detection and quantification of Exserohilum rostratum, a causative pathogen of fungal meningitis associated with injection of contaminated methylprednisolone.. 51. 2013
Differences and similarities between culture-confirmed human granulocytic anaplasmosis and early lyme disease.. 51. 2013
Development and evaluation of a novel, semiautomated Clostridium difficile typing platform.. 51. 2012
Sustained reduction of microbial burden on common hospital surfaces through introduction of copper.. 50. 2012
Survival of methicillin-resistant Staphylococcus aureus and vancomycin-resistant Enterococcus spp. for an extended period of transport.. 50. 2012
Comparison of the Luminex xTAG RVP Fast assay and the Idaho Technology FilmArray RP assay for detection of respiratory viruses in pediatric patients at a cancer hospital.. 50. 2012
Strategy for rapid identification and antibiotic susceptibility testing of gram-negative bacteria directly recovered from positive blood cultures using the Bruker MALDI Biotyper and the BD Phoenix system.. 50. 2012
φ(2)GFP10, a high-intensity fluorophage, enables detection and rapid drug susceptibility testing of Mycobacterium tuberculosis directly from sputum samples.. 50. 2012
Clinical and laboratory characteristics of Clostridium difficile infection in patients with discordant diagnostic test results.. 50. 2012
Galactomannan antigenemia after infusion of gluconate-containing Plasma-Lyte.. 49. 2011
Molecular detection and species-specific identification of medically important Aspergillus species by real-time PCR in experimental invasive pulmonary aspergillosis.. 49. 2011
Molecular epidemiology of carbapenem-nonsusceptible Acinetobacter baumannii in the United States.. 49. 2011
Comparison of performance of the novel chromogenic spectra VRE agar to that of bile esculin azide and Campylobacter agars for detection of vancomycin-resistant enterococci in fecal samples.. 49. 2011
Frequency of panton-valentine leukocidin-producing methicillin-sensitive Staphylococcus strains in patients with complicated skin and soft tissue infection in bronx, new york.. 49. 2011
Comparison of polymyxin B, tigecycline, cefepime, and meropenem MICs for KPC-producing Klebsiella pneumoniae by broth microdilution, Vitek 2, and Etest.. 49. 2011
Evaluation of the 3M rapid detection test for respiratory syncytial virus (RSV) in children during the early stages of the 2009 RSV season.. 49. 2010
Evaluation of the Cepheid Xpert Clostridium difficile Epi assay for diagnosis of Clostridium difficile infection and typing of the NAP1 strain at a cancer hospital.. 48. 2010
Susceptibility profiles, molecular epidemiology, and detection of KPC-producing Escherichia coli isolates from the New York City vicinity.. 48. 2010
Unique hepatitis B virus subgenotype in a primitive tribal community in eastern India.. 48. 2010
Comparison of meropenem MICs and susceptibilities for carbapenemase-producing Klebsiella pneumoniae isolates by various testing methods.. 48. 2010
Comparison of inhibitory mold agar to Sabouraud dextrose agar as a primary medium for isolation of fungi.. 48. 2010
Multiplex PCR-ligation detection reaction assay for simultaneous detection of drug resistance and toxin genes from Staphylococcus aureus, Enterococcus faecalis, and Enterococcus faecium.. 48. 2009
Assessing human immunodeficiency virus type 1 tropism: Comparison of assays using replication-competent virus versus plasma-derived pseudotyped virions.. 47. 2009
Use of spoligotyping and large sequence polymorphisms to study the population structure of the Mycobacterium tuberculosis complex in a cohort study of consecutive smear-positive tuberculosis cases in The Gambia.. 47. 2009
Use of sloppy molecular beacon probes for identification of mycobacterial species.. 47. 2009
Detection of a molecular biomarker for zygomycetes by quantitative PCR assays of plasma, bronchoalveolar lavage, and lung tissue in a rabbit model of experimental pulmonary zygomycosis.. 46. 2008
Detection and serotyping of dengue virus in serum samples by multiplex reverse transcriptase PCR-ligase detection reaction assay.. 46. 2008
Development of multiplex PCR-ligase detection reaction assay for detection of West Nile virus.. 46. 2008
Automated and manual methods of DNA extraction for Aspergillus fumigatus and Rhizopus oryzae analyzed by quantitative real-time PCR.. 46. 2008
Application of sensitive and specific molecular methods to uncover global dissemination of the major RDRio Sublineage of the Latin American-Mediterranean Mycobacterium tuberculosis spoligotype family.. 46. 2008
Geographic and temporal trends in isolation and antifungal susceptibility of Candida parapsilosis: a global assessment from the ARTEMIS DISK Antifungal Surveillance Program, 2001 to 2005.. 46. 2008
Sputum smear microscopy: evaluation of impact of training, microscope distribution, and use of external quality assessment guidelines for resource-poor settings.. 46. 2008
Candida krusei, a multidrug-resistant opportunistic fungal pathogen: geographic and temporal trends from the ARTEMIS DISK Antifungal Surveillance Program, 2001 to 2005.. 46. 2007
Potential of a simplified p24 assay for early diagnosis of infant human immunodeficiency virus type 1 infection in Haiti.. 45. 2007
Multiplexed identification of blood-borne bacterial pathogens by use of a novel 16S rRNA gene PCR-ligase detection reaction-capillary electrophoresis assay.. 45. 2007
Frequent occult infection with Cytomegalovirus in cardiac transplant recipients despite antiviral prophylaxis.. 45. 2007
Multicenter evaluation of the new VITEK 2 advanced colorimetric yeast identification card.. 45. 2007
Prevalence and antibacterial susceptibility of mef(A)-positive macrolide-resistant Streptococcus pneumoniae over 4 years (2000 to 2004) of the PROTEKT US Study.. 45. 2006
Candida guilliermondii, an opportunistic fungal pathogen with decreased susceptibility to fluconazole: geographic and temporal trends from the ARTEMIS DISK antifungal surveillance program.. 44. 2006
Candida rugosa, an emerging fungal pathogen with resistance to azoles: geographic and temporal trends from the ARTEMIS DISK antifungal surveillance program.. 44. 2006
Characterization and comparison of galactomannan enzyme immunoassay and quantitative real-time PCR assay for detection of Aspergillus fumigatus in bronchoalveolar lavage fluid from experimental invasive pulmonary aspergillosis.. 44. 2006
Comparative study of the new colorimetric VITEK 2 yeast identification card versus the older fluorometric card and of CHROMagar Candida as a source medium with the new card.. 44. 2006
Rapid, noninvasive diagnosis of visceral leishmaniasis in India: comparison of two immunochromatographic strip tests for detection of anti-K39 antibody.. 44. 2006
Use of quantitative real-time PCR to study the kinetics of extracellular DNA released from Candida albicans, with implications for diagnosis of invasive Candidiasis.. 44. 2006
CHROMagar Candida as the sole primary medium for isolation of yeasts and as a source medium for the rapid-assimilation-of-trehalose test.. 43. 2005
Detection of galactomannan antigenemia in patients receiving piperacillin-tazobactam and correlations between in vitro, in vivo, and clinical properties of the drug-antigen interaction.. 42. 2004
Emergence of vanA Genotype Vancomycin-Resistant Enterococci with Low or Moderate Levels of Teicoplanin Resistance in Korea.. 42. 2004
Identification of Bordetella pertussis in a critically ill human immunodeficiency virus-infected patient by direct genotypical analysis of Gram-stained material and discrimination from B. holmesii by using a unique recA gene restriction enzyme site.. 42. 2004
International clones of methicillin-resistant Staphylococcus aureus in two hospitals in Miami, Florida.. 42. 2004
Development and validation of a quantitative real-time PCR assay using fluorescence resonance energy transfer technology for detection of Aspergillus fumigatus in experimental invasive pulmonary aspergillosis.. 41. 2003
Snapshot of moving and expanding clones of Mycobacterium tuberculosis and their global distribution assessed by spoligotyping in an international study.. 41. 2003
Evolution of a vancomycin-intermediate Staphylococcus aureus strain in vivo: multiple changes in the antibiotic resistance phenotypes of a single lineage of methicillin-resistant S. aureus under the impact of antibiotics administered for chemotherapy.. 41. 2003
Molecular characterization and drug resistance patterns of strains of Mycobacterium tuberculosis isolated from patients in an AIDS counseling center in Port-au-Prince, Haiti: a 1-year study.. 41. 2003
Frequent recovery of a single clonal type of multidrug-resistant Staphylococcus aureus from patients in two hospitals in Taiwan and China.. 41. 2003
Pilot study of the genetic diversity of the pneumococcal nasopharyngeal flora among children attending day care centers.. 40. 2002
Analysis of sequences and loci of p44 homologs expressed by Anaplasma phagocytophila in acutely infected patients.. 40. 2002
Comparison of four antiseptic preparations for skin in the prevention of contamination of percutaneously drawn blood cultures: a randomized trial.. 40. 2002
Western blot analysis of sera reactive to human monocytic ehrlichiosis and human granulocytic ehrlichiosis agents.. 39. 2001
Nomenclature of major antimicrobial-resistant clones of Streptococcus pneumoniae defined by the pneumococcal molecular epidemiology network.. 39. 2001
Genetic diversity and clonal patterns among antibiotic-susceptible and -resistant Streptococcus pneumoniae colonizing children: day care centers as autonomous epidemiological units.. 38. 2000
Cutaneous microenvironment of human immunodeficiency virus (HIV)-seropositive and HIV-seronegative individuals, with special reference to Staphylococcus aureus colonization.. 38. 2000
Molecular evolution in a multidrug-resistant lineage of Streptococcus pneumoniae: emergence of strains belonging to the serotype 6B Icelandic clone that lost antibiotic resistance traits.. 38. 2000
Serology of culture-confirmed cases of human granulocytic ehrlichiosis.. 38. 2000
Prophage carriage as a molecular epidemiological marker in Streptococcus pneumoniae.. 37. 1999
Molecular characterization of penicillin-resistant Streptococcus pneumoniae isolates from Bulgaria.. 37. 1999
Molecular epidemiology of penicillin-resistant Streptococcus pneumoniae isolates recovered in Italy from 1993 to 1996.. 36. 1998
Cloning and expression of the 44-kilodalton major outer membrane protein gene of the human granulocytic ehrlichiosis agent and application of the recombinant protein to serodiagnosis.. 36. 1998
Comparison of major antigenic proteins of six strains of the human granulocytic ehrlichiosis agent by Western immunoblot analysis.. 35. 1997
Detection of endocervical anti-Chlamydia trachomatis immunoglobulin A in pregnant women by a rapid, 6-minute enzyme-linked immunosorbent assay: comparison with PCR and chlamydial antigen detection methods.. 35. 1997
Four-day incubation period for blood culture bottles processed with the Difco ESP blood culture system.. 35. 1997
Interpretive criteria and quality control parameters for testing of susceptibilities of Haemophilus influenzae and Streptococcus pneumoniae to trimethoprim and trimethoprim-sulfamethoxazole. The Antimicrobial Susceptibility Testing OC Group.. 35. 1997
Methicillin-resistant Staphylococcus aureus isolates recovered from a New York City hospital: analysis by molecular fingerprinting techniques.. 34. 1996
Geographic spread of epidemic multiresistant Staphylococcus aureus clone in Brazil.. 33. 1995
Double-repetitive-element PCR method for subtyping Mycobacterium tuberculosis clinical isolates.. 33. 1995
Evidence for the geographic spread of a methicillin-resistant Staphylococcus aureus clone between Portugal and Spain.. 33. 1995
Spread and maintenance of a dominant methicillin-resistant Staphylococcus aureus (MRSA) clone during an outbreak of MRSA disease in a Spanish hospital.. 32. 1994
Cross-reactive antibodies induced by a monovalent influenza B virus vaccine.. 29. 1991
Seroprevalence of helicobacter pylori infection in couples.. 29. 1991
Quality control criteria for testing the susceptibility of anaerobic bacteria to meropenem.. 28. 1990
Resistance to serum bactericidal activity distinguishes Brazilian purpuric fever (BPF) case strains of Haemophilus influenzae biogroup aegyptius (H. aegyptius) from non-BPF strains. Brazilian Purpuric Fever Study Group.. 27. 1989
Variation in penicillin-binding protein patterns of penicillin-resistant clinical isolates of pneumococci.. 27. 1989
DNA probe for identification of Streptococcus pneumoniae.. 27. 1989
Quantification of immunoglobulin on electrophoretic immunoblot strips as a tool for human immunodeficiency virus serodiagnosis.. 26. 1988
Specificities and sensitivities of three systems for determination of antibodies to human immunodeficiency virus by electrophoretic immunoblotting.. 26. 1988
Immunization of elderly people with two doses of influenza vaccine.. 25. 1987
Association of infection caused by Pseudomonas aeruginosa serotype O11 with intravenous abuse of pentazocine mixed with tripelennamine.. 20. 1984
Testicular cultivation of Treponema pallidum (Nichols strains) facilitated by sustained-release steroid administration.. 10. 1979
The Search for a Practical Method for Colistin Susceptibility Testing: Have We Found It by Going Back to the Future? 2019
Integration of whole-genome sequencing into infection control practices: the potential and the hurdles. 2015
Potential of Inaccurate Cefiderocol Susceptibility Results: a CLSI AST Subcommittee Advisory. 2023
Reply to "risks of 'blind' automated identification systems in medical microbiology". 2013
Decreased susceptibility to polymyxin B during treatment for carbapenem-resistant Klebsiella pneumoniae infection. 2009
Role of Clinicogenomics in Infectious Disease Diagnostics and Public Health Microbiology. 2016
Can You Speciate This for Me? A Micro-Comic Strip.. 57. 2019
Answer to December 2016 Photo Quiz.. 54. 2016
Photo Quiz: A 4-Year-Old Boy Vomits on His Sister.. 54. 2016
Closing the Brief Case: Cryptococcus gattii Meningitis with Ventriculitis.. 54. 2016
The Brief Case: Cryptococcus gattii Meningitis with Ventriculitis.. 54. 2016
Ultrasensitive Diagnostics for Low-Density Asymptomatic Plasmodium falciparum Infections in Low-Transmission Settings. 2021
Assessing Clinical Microbiology Practice Guidelines: American Society for Microbiology Ad Hoc Committee on Evidence-Based Laboratory Medicine Practice Guidelines Assessment. 2017
Babesia microti: from Mice to Ticks to an Increasing Number of Highly Susceptible Humans. 2017
Spontaneous bacterial pericarditis with tamponade due to Ureaplasma spp. 2009
Severe necrotizing fasciitis in a human immunodeficiency virus-positive patient caused by methicillin-resistant Staphylococcus aureus. 2008
Histoplasma capsulatum sinusitis. 1997

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